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1

A Bivalent Chromatin Structure Marks Key Developmental Genes in Embryonic Stem Cells

Bradley E. Bernstein, Tarjei S. Mikkelsen, Xiaohui Xie, Michael Kamal, Dana J. Huebert, James Cuff, Ben Fry, Alex Meissner, Marius Wernig, Kathrin Plath, Rudolf Jaenisch, Alexandre Wagschal, Robert Fe

Journal:

Year:

2006

Language:

english

File:

PDF, 720 KB

english, 2006

2

The Mammalian Epigenome

Bradley E. Bernstein, Alexander Meissner, Eric S. Lander

Journal:

Year:

2007

Language:

english

File:

PDF, 634 KB

english, 2007

3

Insulator dysfunction and oncogene activation in IDH mutant gliomas

Flavahan, William A., Drier, Yotam, Liau, Brian B., Gillespie, Shawn M., Venteicher, Andrew S., Stemmer-Rachamimov, Anat O., Suvà, Mario L., Bernstein, Bradley E.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.37 MB

english, 2015

4

Psychometric properties of the Quick Inventory of Depressive Symptomatology in adolescents

Ira H. Bernstein, A. John Rush, Madhukar H. Trivedi, Carroll W. Hughes, Laurie Macleod, Bradley P. Witte, Shailesh Jain, Taryn L. Mayes, Graham J. Emslie

Journal:

International Journal of Methods in Psychiatric Research

Year:

2010

Language:

english

File:

PDF, 286 KB

english, 2010

5

In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state

Wernig, Marius, Meissner, Alexander, Foreman, Ruth, Brambrink, Tobias, Ku, Manching, Hochedlinger, Konrad, Bernstein, Bradley E., Jaenisch, Rudolf

Journal:

Year:

2007

Language:

english

File:

PDF, 1.31 MB

english, 2007

6

Charting histone modifications and the functional organization of mammalian genomes

Zhou, Vicky W., Goren, Alon, Bernstein, Bradley E.

Journal:

Nature Reviews Genetics

Year:

2010

Language:

english

File:

PDF, 901 KB

english, 2010

7

Genomic Maps and Comparative Analysis of Histone Modifications in Human and Mouse

Bradley E. Bernstein, Michael Kamal, Kerstin Lindblad-Toh, Stefan Bekiranov, Dione K. Bailey, Dana J. Huebert, Scott McMahon, Elinor K. Karlsson, Edward J. Kulbokas III, Thomas R. Gingeras, Stuart L.

Journal:

Year:

2005

Language:

english

File:

PDF, 790 KB

english, 2005

8

DNA-protein interactions in high definition

Eric M Mendenhall, Bradley E Bernstein

Journal:

Year:

2012

Language:

english

File:

PDF, 101 KB

english, 2012

9

Charting a dynamic DNA methylation landscape of the human genome

Ziller, Michael J., Gu, Hongcang, Müller, Fabian, Donaghey, Julie, Tsai, Linus T.-Y., Kohlbacher, Oliver, De Jager, Philip L., Rosen, Evan D., Bennett, David A., Bernstein, Bradley E., Gnirke, Andreas

Journal:

Year:

2013

Language:

english

File:

PDF, 524 KB

english, 2013

10

Locus-specific editing of histone modifications at endogenous enhancers

Mendenhall, Eric M, Williamson, Kaylyn E, Reyon, Deepak, Zou, James Y, Ram, Oren, Joung, J Keith, Bernstein, Bradley E

Journal:

Nature Biotechnology

Year:

2013

Language:

english

File:

PDF, 520 KB

english, 2013

11

Targeted DNA demethylation and activation of endogenous genes using programmable TALE-TET1 fusion proteins

Maeder, Morgan L, Angstman, James F, Richardson, Marcy E, Linder, Samantha J, Cascio, Vincent M, Tsai, Shengdar Q, Ho, Quan H, Sander, Jeffry D, Reyon, Deepak, Bernstein, Bradley E, Costello, Joseph F

Journal:

Nature Biotechnology

Year:

2013

Language:

english

File:

PDF, 985 KB

english, 2013

12

Clinical significance of pegylated interferon induced neutropenia: Results from the WIN-R trial

Ahmed, Furqaan, Jacobson, Ira M., Brown, Robert S., Afdhal, Nezam, Rubin, Raymond, Spivey, James, Freilich, Bradley, Regenstein, Fredric, Bernstein, David, Doig, Robert, Brass, Clifford

Journal:

Gastroenterology

Year:

2003

Language:

english

File:

PDF, 276 KB

english, 2003

13

Educating through Drama || Becoming Involved: Spolin Theater Games in Classes for the Educationally Handicapped

Bradley Bernstein

Journal:

Theory Into Practice

Year:

1985

Language:

english

File:

PDF, 179 KB

english, 1985

14

Lutein, Zeaxanthin, and meso-Zeaxanthin: The Basic and Clinical Science Underlying Carotenoid-based Nutritional Interventions against Ocular Disease

Bernstein, Paul S., Li, Binxing, Vachali, Preejith P., Gorusupudi, Aruna, Shyam, Rajalekshmy, Henriksen, Bradley S., Nolan, John M.

Journal:

Progress in Retinal and Eye Research

Year:

2015

Language:

english

File:

PDF, 14.84 MB

english, 2015

15

Epigenetic plasticity and the hallmarks of cancer

Flavahan, William A., Gaskell, Elizabeth, Bernstein, Bradley E.

Journal:

Year:

2017

Language:

english

File:

PDF, 1004 KB

english, 2017

16

Development of a nationally-representative coordinated registry network for prostate ablation technologies

Golan, Ron, Bernstein, Adrien, Sedrakyan, Art, Daskivich, Timothy J., Du, Dongyi T., Ehdaie, Behfar, Fisher, Benjamin, Gorin, Michael A., Grunberger, Ivan, Hunt, Bradley, Jiang, Hongying H., Kim, Hyun

Journal:

The Journal of Urology

Year:

2018

Language:

english

File:

PDF, 263 KB

english, 2018

17

Syphilis testing among sexually active men who have sex with men and who are receiving medical care for HIV in the United States—Medical Monitoring Project, 2013–2014

de Voux, Alex, Bernstein, Kyle, Bradley, Heather, Kirkcaldy, Robert D, Tie, Yunfeng, Shouse, R Luke

Journal:

Clinical Infectious Diseases

Year:

2018

Language:

english

File:

PDF, 597 KB

english, 2018

18

Single-cell and single-molecule epigenomics to uncover genome regulation at unprecedented resolution

Shema, Efrat, Bernstein, Bradley E., Buenrostro, Jason D.

Journal:

Nature Genetics

Year:

2018

Language:

english

File:

PDF, 1.48 MB

english, 2018

19

A general method of domain closure is applied to phosphoglycerate kinase and the result compared with the crystal structure of a closed conformation of the enzyme

Nagasuma R. Chandra, Hilary Muirhead, J. John Holbrook, Bradley E. Bernstein, Wim G.J. Hol, Richard B. Sessions

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1998

Language:

english

File:

PDF, 424 KB

english, 1998

20

Gallbladder Glycoprotein Secretion in Mice with Hemolytic Anemia and Pigment Gallstones

J.Thomas LaMont, Bradley S. Turner, Seldon E. Bernstein, Bruce W. Trotman

Journal:

Year:

1983

Language:

english

File:

PDF, 346 KB

english, 1983

21

Peginterferon alfa-2b and weight-based or flat-dose ribavirin in chronic hepatitis C patients: A randomized trial

Ira M. Jacobson, Robert S. Brown Jr, Bradley Freilich, Nezam Afdhal, Paul Y. Kwo, John Santoro, Scott Becker, Adil E. Wakil, David Pound, Eliot Godofsky, Robert Strauss, David Bernstein, Steven Flamm,

Journal:

Year:

2007

Language:

english

File:

PDF, 339 KB

english, 2007

22

Monoclonal antibody to human cartilage cells and its reactivities to chondrocytic tumors

A. Bradley Eisenbrey, Jenn C. Chen, Charissa A. Dyer, Jay Bernstein, Miroslav D. Poulik

Journal:

Journal of Clinical Laboratory Analysis

Year:

1991

Language:

english

File:

PDF, 777 KB

english, 1991

23

Rpd3p Relocation Mediates a Transcriptional Response to Rapamycin in Yeast

Emily L Humphrey, Alykhan F Shamji, Bradley E Bernstein, Stuart L Schreiber

Journal:

Chemistry & Biology

Year:

2004

Language:

english

File:

PDF, 758 KB

english, 2004

24

Perceptions of emergency care by the elderly: Results of multicenter focus group interviews

Larry J Baraff, Edward Bernstein, Keith Bradley, Carol Franken, Lowell W Gerson, Suzanne R Hannegan, Karen S Kober, Sidney Lee, Michael Marotta, Allan B Wolfson

Journal:

Annals of Emergency Medicine

Year:

1992

Language:

english

File:

PDF, 425 KB

english, 1992

25

The importance of dynamic light scattering in obtaining multiple crystal forms of trypanosoma brucei PGK

Bradley E. Bernstein, Paul A. M. Michels, Hidong Kim, Philip H. Petra, Wim G. J. Hol

Journal:

Protein Science

Year:

1998

Language:

english

File:

PDF, 456 KB

english, 1998

26

Global Approaches to Chromatin

Bradley E Bernstein, Stuart L Schreiber

Journal:

Chemistry & Biology

Year:

2002

Language:

english

File:

PDF, 243 KB

english, 2002

27

Synergistic effects of substrate-induced conformational changes in phosphoglycerate kinase activation

Bernstein, Bradley E., Michels, Paul A. M., Hol, Wim G. J.

Journal:

Year:

1997

File:

PDF, 1.17 MB

1997

28

Moving AHEAD with an international human epigenome project

Jones, Peter A., Archer, Trevor K., Baylin, Stephen B., Beck, Stephan, Berger, Shelley, Bernstein, Bradley E., Carpten, John D., Clark, Susan J., Costello, Joseph F., Doerge, Rebecca W.

Journal:

Year:

2008

Language:

english

File:

PDF, 440 KB

english, 2008

29

Active genes are tri-methylated at K4 of histone H3

Santos-Rosa, Helena, Schneider, Robert, Bannister, Andrew J., Sherriff, Julia, Bernstein, Bradley E., Emre, N. C. Tolga, Schreiber, Stuart L., Mellor, Jane, Kouzarides, Tony

Journal:

Year:

2002

Language:

english

File:

PDF, 206 KB

english, 2002

30

Dissecting direct reprogramming through integrative genomic analysis

Mikkelsen, Tarjei S., Hanna, Jacob, Zhang, Xiaolan, Ku, Manching, Wernig, Marius, Schorderet, Patrick, Bernstein, Bradley E., Jaenisch, Rudolf, Lander, Eric S., Meissner, Alexander

Journal:

Year:

2008

Language:

english

File:

PDF, 717 KB

english, 2008

31

Genome-scale DNA methylation maps of pluripotent and differentiated cells

Meissner, Alexander, Mikkelsen, Tarjei S., Gu, Hongcang, Wernig, Marius, Hanna, Jacob, Sivachenko, Andrey, Zhang, Xiaolan, Bernstein, Bradley E., Nusbaum, Chad, Jaffe, David B., Gnirke, Andreas, Jaeni

Journal:

Year:

2008

Language:

english

File:

PDF, 3.06 MB

english, 2008

32

Dissecting direct reprogramming through integrative genomic analysis

Mikkelsen, Tarjei S., Hanna, Jacob, Zhang, Xiaolan, Ku, Manching, Wernig, Marius, Schorderet, Patrick, Bernstein, Bradley E., Jaenisch, Rudolf, Lander, Eric S., Meissner, Alexander

Journal:

Year:

2008

File:

PDF, 56 KB

2008

33

The NIH Roadmap Epigenomics Mapping Consortium

Bernstein, Bradley E, Stamatoyannopoulos, John A, Costello, Joseph F, Ren, Bing, Milosavljevic, Aleksandar, Meissner, Alexander, Kellis, Manolis, Marra, Marco A, Beaudet, Arthur L, Ecker, Joseph R

Journal:

Nature Biotechnology

Year:

2010

Language:

english

File:

PDF, 445 KB

english, 2010

34

A mutant p53 transgene accelerates tumour development in heterozygous but not nullizygous p53–deficient mice

Harvey, Michele, Vogel, Hannes, Morris, Danna, Bradley, Allan, Bernstein, Alan, Donehower, Lawrence A.

Journal:

Nature Genetics

Year:

1995

File:

PDF, 807 KB

1995

35

Genome-wide chromatin maps derived from limited numbers of hematopoietic progenitors

Adli, Mazhar, Zhu, Jiang, Bernstein, Bradley E

Journal:

Year:

2010

Language:

english

File:

PDF, 922 KB

english, 2010

36

Molecular regulation of H3K4 trimethylation by ASH2L, a shared subunit of MLL complexes

Steward, Melissa M, Lee, Jung-Shin, O'Donovan, Aisling, Wyatt, Matt, Bernstein, Bradley E, Shilatifard, Ali

Journal:

Nature Structural and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 253 KB

english, 2006

37

Whole-genome chromatin profiling from limited numbers of cells using nano-ChIP-seq

Adli, Mazhar, Bernstein, Bradley E

Journal:

Nature Protocols

Year:

2011

Language:

english

File:

PDF, 503 KB

english, 2011

38

A Tell-Tail Sign of Chromatin: Histone Mutations Drive Pediatric Glioblastoma

Esther Rheinbay, David N. Louis, Bradley E. Bernstein, Mario L. Suvà

Journal:

Year:

2012

Language:

english

File:

PDF, 814 KB

english, 2012

39

Data acquisition and readout system for the LUX dark matter experiment

D.S. Akerib, X. Bai, S. Bedikian, E. Bernard, A. Bernstein, A. Bradley, S.B. Cahn, M.C. Carmona-Benitez, D. Carr, J.J. Chapman, K. Clark, T. Classen, T. Coffey, A. Curioni, S. Dazeley, L. de Viveiros,

Journal:

Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment

Year:

2012

Language:

english

File:

PDF, 536 KB

english, 2012

40

LUXSim: A component-centric approach to low-background simulations

D.S. Akerib, X. Bai, S. Bedikian, E. Bernard, A. Bernstein, A. Bradley, S.B. Cahn, M.C. Carmona-Benitez, D. Carr, J.J. Chapman, K. Clark, T. Classen, T. Coffey, S. Dazeley, L. de Viveiros, A. Dobi, M.

Journal:

Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment

Year:

2012

Language:

english

File:

PDF, 1.51 MB

english, 2012

41

Impact of troponin T determinations on hospital resource utilization and costs in the evaluation of patients with suspected myocardial ischemia

Stuart Zarich, Keith Bradley, Julianne Seymour, Wael Ghali, Amar Traboulsi, Inder Dip Mayall, Larry Bernstein

Journal:

The American Journal of Cardiology

Year:

2001

Language:

english

File:

PDF, 65 KB

english, 2001

42

Development and validation of a T7 based linear amplification for genomic DNA

Chih Long Liu, Stuart L Schreiber, Bradley E Bernstein

Journal:

Year:

2003

Language:

english

File:

PDF, 899 KB

english, 2003

43

Using surveillance data to monitor entry into care of newly diagnosed HIV-infected persons: San Francisco, 2006–2007

Nicola M Zetola, Kyle Bernstein, Katherine Ahrens, Julia L Marcus, Susan Philip, Giuliano Nieri, Diane Jones, C Bradley Hare, Ling Hsu, Susan Scheer, Jeffrey D Klausner

Journal:

BMC Public Health

Year:

2009

Language:

english

File:

PDF, 200 KB

english, 2009

44

Activation of Notch Signaling During Ex Vivo Expansion Maintains Donor Muscle Cell Engraftment

Maura H. Parker, Carol Loretz, Ashlee E. Tyler, William J. Duddy, John K. Hall, Bradley B. Olwin, Irwin D. Bernstein, Rainer Storb, Stephen J. Tapscott

Journal:

Year:

2012

Language:

english

File:

PDF, 795 KB

english, 2012

45

A bisubstrate analog induces unexpected conformational changes in phosphoglycerate kinase from Trypanosoma brucei

Bradley E Bernstein, David M Williams, Jerome C Bressi, Peter Kuhn, Michael H Gelb, G.Michael Blackburn, Wim G.J Hol

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 2.74 MB

english, 1998

46

Minor elevations in troponin T values enhance risk assessment in emergency department patients with suspected myocardial ischemia: analysis of novel troponin T cut-off values

Stuart W. Zarich, Keith Bradley, Inder Dip Mayall, Larry H. Bernstein

Journal:

Clinica Chimica Acta

Year:

2004

Language:

english

File:

PDF, 104 KB

english, 2004

47

Role for Dpy-30 in ES Cell-Fate Specification by Regulation of H3K4 Methylation within Bivalent Domains

Hao Jiang, Abhijit Shukla, Xiaoling Wang, Wei-yi Chen, Bradley E. Bernstein, Robert G. Roeder

Journal:

Year:

2011

Language:

english

File:

PDF, 1.22 MB

english, 2011

48

Role for Dpy-30 in ES Cell-Fate Specification by Regulation of H3K4 Methylation within Bivalent Domains

Hao Jiang, Abhijit Shukla, Xiaoling Wang, Wei-yi Chen, Bradley E. Bernstein, Robert G. Roeder

Journal:

Year:

2011

File:

PDF, 33 KB

2011

49

DNA Sequence-Dependent Compartmentalization and Silencing of Chromatin at the Nuclear Lamina

Joseph M. Zullo, Ignacio A. Demarco, Roger Piqué-Regi, Daniel J. Gaffney, Charles B. Epstein, Chauncey J. Spooner, Teresa R. Luperchio, Bradley E. Bernstein, Jonathan K. Pritchard, Karen L. Reddy, Har

Journal:

Year:

2012

Language:

english

File:

PDF, 1.81 MB

english, 2012

50

Endovascular recanalization for subacute symptomatic intracranial arterial occlusion: A report of two cases

Bradley A. Gross, Michael C. Hurley, Richard Bernstein, Ali Shaibani, H. Hunt Batjer, Bernard R. Bendok

Journal:

Clinical Neurology and Neurosurgery

Year:

2008

Language:

english

File:

PDF, 1.14 MB

english, 2008